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Pyrosequencer

The Pyrosequencer is used to detect and quantify genetic variations within short, targeted DNA sequences. It can detect low-level variation in multiple samples quickly, making it cost effective and efficient. The biotinylated single-stranded DN

Pyrosequencer

Contacts and Location

Contact 1 Mihails Bariševs
Contact 2 Linda Gabrusenoka
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Organisational Unit Rīga Stradiņš University
    Institute of Microbiology and Virology - Latvia, Rīga

Description

The Pyrosequencer is used to detect and quantify genetic variations within short, targeted DNA sequences. It can detect low-level variation in multiple samples quickly, making it cost effective and efficient. The biotinylated single-stranded DNA template is loaded on a plate, and the machine adds dNTPs. The dNTPs release pyrophosphate when attached to the template, allowing for a signal to be given off in respect to which dNTP and the quantity that is incorporated.

Specification

  • Input voltage and current:100–240 V AC, 47–63 Hz, 1.1–0.45 A (grounded) From the external power supplies to the instrument: 12 VDC and 24 VDC nominal - Power consumption Maximum: 160 Watt - Laboratory environment: Ambient temperature: 15–32°C (59–90°F) - Ambient humidity: 20–90% relative humidity - Weight: 27.5 kg (60.6 lb.) - Connections: One USB port (2.0) - Capacity:1–24 samples/run - Batch format: 24-well microtiter plate, PyroMark Q24 Plate - Process temperature: 28°C (82.4°F) +/-1% - Process time: Depending on the number of dispensations (20 dispensations take 24 minutes) - PyroMark Q24 Vacuum Workstation - Laboratory environment: Ambient temperature: 15–32°C (59–90°F) - Ambient humidity: 20–90% relative humidity - Process time: Less than 13 minutes for up to 24 samples in parallel

Services

  • Mutation analysis: Pyrosequencing technology is based on the sequencing by synthesis principle. Incorporation of a nucleotide by a polymerase using a single-stranded PCR (or RT-PCR) fragment as template ensures precision and accuracy when performing highly sensitive mutational analysis.
  • Methylation analysis: Pyrosequencing generates highly reproducible quantification of methylation frequencies at individual consecutive CpG sites. Built-in bisulfite treatment controls eliminate manual estimation of non-converted DNA levels and prevent false-positive methylation detection, ensuring reliable results.
  • Microbial identification: Unlike hybridization techniques, Pyrosequencing allows the identification of a large number of species using a single conserved primer. Consequently, DNA extracted from multiple microbe species can be sequenced in the same pyrosequencing run. PyroMark IdentiFire Software compiles local sequence database against which imported

Status

Upon agreement

Funding Source

Other -
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Manufacturer

Qiagen

Model

PyroMark Q24

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